7Q9Y image
Deposition Date 2021-11-15
Release Date 2022-10-19
Last Version Date 2025-07-02
Entry Detail
PDB ID:
7Q9Y
Keywords:
Title:
Cryo-EM structure of the octameric pore of Clostridium perfringens beta-toxin.
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.84 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Clostridium perfringens beta toxin
Chain IDs:A, B, C, D, E, F, G, H
Chain Length:309
Number of Molecules:8
Biological Source:Clostridium perfringens CPE
Ligand Molecules
Primary Citation
Cryo-EM structure of the octameric pore of Clostridium perfringens beta-toxin.
Embo Rep. 23 e54856 e54856 (2022)
PMID: 36215680 DOI: 10.15252/embr.202254856

Abstact

Clostridium perfringens is one of the most widely distributed and successful pathogens producing an impressive arsenal of toxins. One of the most potent toxins produced is the C. perfringens β-toxin (CPB). This toxin is the main virulence factor of type C strains. We describe the cryo-electron microscopy (EM) structure of CPB oligomer. We show that CPB forms homo-octameric pores like the hetero-oligomeric pores of the bi-component leukocidins, with important differences in the receptor binding region and the N-terminal latch domain. Intriguingly, the octameric CPB pore complex contains a second 16-stranded β-barrel protrusion atop of the cap domain that is formed by the N-termini of the eight protomers. We propose that CPB, together with the newly identified Epx toxins, is a member a new subclass of the hemolysin-like family. In addition, we show that the β-barrel protrusion domain can be modified without affecting the pore-forming ability, thus making the pore particularly attractive for macromolecule sensing and nanotechnology. The cryo-EM structure of the octameric pore of CPB will facilitate future developments in both nanotechnology and basic research.

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Primary Citation of related structures