ISDA: 7Q4N

Deposition Date 2021-11-01

Release Date 2022-11-16

Last Version Date 2024-01-31

Entry Detail

PDB ID:

7Q4N

Keywords:

TRANSCRIPTION

Title:

transcription factor CDX2 bound to hydroxymethylated DNA

Biological Source:

Source Organism(s):

Homo sapiens (Taxon ID: 9606)

Expression System(s):

Escherichia coli bl21(de3)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

3.20 Å

R-Value Free:

0.27

R-Value Work:

0.23

R-Value Observed:

0.24

Space Group:

I 1 2 1

Download Validation Report

Macromolecular Entities

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (18-MER)
Chain IDs:A, D (auth: B)
Chain Length:18
Number of Molecules:2
Biological Source:Homo sapiens

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (18-MER)
Chain IDs:B (auth: D), E
Chain Length:18
Number of Molecules:2
Biological Source:Homo sapiens

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Homeobox protein CDX-2
Gene (Uniprot):CDX2
Chain IDs:C (auth: K), F (auth: C)
Chain Length:67
Number of Molecules:2
Biological Source:Homo sapiens

UniProt ID:Q99626 Pfam ID:PF00046

Primary Citation

transcription factor CDX2 bound to hydroxymethylated DNA

Morgunova, E, Yin, Y, Popov, A, Taipale, J.Show

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