7Q3R image
Deposition Date 2021-10-28
Release Date 2022-11-16
Last Version Date 2024-10-23
Entry Detail
PDB ID:
7Q3R
Keywords:
VIRAL PROTEIN
Title:
Crystal structure of SARS-CoV-2 RBD in complex with the neutralizing nanobodies VHH-F04 and VHH-G09
Biological Source:
Source Organism:
Severe acute respiratory syndrome coronavirus 2 (Taxon ID: 2697049)
Vicugna pacos (Taxon ID: 30538)
Host Organism:
Homo sapiens
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.92 Å
R-Value Free:
0.20
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 63
7Q3R validation report
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Spike glycoprotein
Chain IDs:A
Chain Length:198
Number of Molecules:1
Biological Source:Severe acute respiratory syndrome coronavirus 2
UniProt ID:P0DTC2 Pfam ID:PF09408
Polymer Type:polypeptide(L)
Molecule:VHH-F04
Chain IDs:B (auth: F)
Chain Length:142
Number of Molecules:1
Biological Source:Vicugna pacos
Polymer Type:polypeptide(L)
Molecule:VHH-G09
Chain IDs:C (auth: G)
Chain Length:135
Number of Molecules:1
Biological Source:Vicugna pacos
Ligand Molecules
CL
Primary Citation
NANOBODIES AGAINST SARS-COV-2 NEUTRALIZE VARIANTS OF CONCERN AND EXPLORE CONFORMATIONAL DIFFERENCES ON THE SPIKE PROTEIN
To Be Published ? ? ? (?)
Primary Citation of related structures
7Q3R