7Q2X image
Entry Detail
PDB ID:
7Q2X
EMDB ID:
Keywords:
Title:
Cryo-EM structure of clamped S.cerevisiae condensin-DNA complex (Form I)
Biological Source:
PDB Version:
Deposition Date:
2021-10-26
Release Date:
2022-03-23
Method Details:
Experimental Method:
Resolution:
3.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Structural maintenance of chromosomes protein 2
Chain IDs:A
Chain Length:1170
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C
Polymer Type:polypeptide(L)
Description:Structural maintenance of chromosomes protein 4
Chain IDs:B
Chain Length:1418
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C
Polymer Type:polypeptide(L)
Description:Condensin complex subunit 2
Chain IDs:C
Chain Length:754
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C
Polymer Type:polypeptide(L)
Description:Condensin complex subunit 1
Chain IDs:D
Chain Length:1176
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C
Polymer Type:polydeoxyribonucleotide
Description:DNA (36-MER)
Chain IDs:E (auth: F)
Chain Length:36
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Description:DNA (36-MER)
Chain IDs:F (auth: G)
Chain Length:36
Number of Molecules:1
Biological Source:synthetic construct
Primary Citation
Clamping of DNA shuts the condensin neck gate.
Proc.Natl.Acad.Sci.USA 119 e2120006119 e2120006119 (2022)
PMID: 35349345 DOI: 10.1073/pnas.2120006119

Abstact

SignificanceDNA needs to be compacted to fit into nuclei and during cell division, when dense chromatids are formed for their mechanical segregation, a process that depends on the protein complex condensin. It forms and enlarges loops in DNA through loop extrusion. Our work resolves the atomic structure of a DNA-bound state of condensin in which ATP has not been hydrolyzed. The DNA is clamped within a compartment that has been reported previously in other structural maintenance of chromosomes (SMC) complexes, including Rad50, cohesin, and MukBEF. With the caveat of important differences, it means that all SMC complexes cycle through at least some similar states and undergo similar conformational changes in their head modules, while hydrolyzing ATP and translocating DNA.

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Primary Citation of related structures