7PR5 image
Entry Detail
PDB ID:
7PR5
Title:
Cocrystal of an RSL-N23H and sulfonato-thiacalix[4]arene - zinc complex
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2021-09-20
Release Date:
2022-03-02
Method Details:
Experimental Method:
Resolution:
1.94 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Fucose-binding lectin protein
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L
Chain Length:90
Number of Molecules:12
Biological Source:Ralstonia solanacearum
Primary Citation
Protein Frameworks with Thiacalixarene and Zinc.
Cryst.Growth Des. 22 3271 3276 (2022)
PMID: 35529063 DOI: 10.1021/acs.cgd.2c00108

Abstact

Controlled protein assembly provides a means to generate biomaterials. Synthetic macrocycles such as the water-soluble sulfonato-calix[n]arenes are useful mediators of protein assembly. Sulfonato-thiacalix[4]arene (tsclx 4), with its metal-binding capacity, affords the potential for simultaneous macrocycle- and metal-mediated protein assembly. Here, we describe the tsclx 4 -/Zn-directed assembly of two proteins: cationic α-helical cytochrome c (cyt c) and neutral β-propeller Ralstonia solanacearum lectin (RSL). Two co-crystal forms were obtained with cyt c, each involving multinuclear zinc sites supported by the cone conformation of tsclx 4 . The tsclx 4 /Zn cluster acted as an assembly node via both lysine encapsulation and metal-mediated protein-protein contacts. In the case of RSL, tsclx 4 adopted the 1,2-alternate conformation and supported a dinuclear zinc site with concomitant encapsulation and metal-binding of two histidine side chains. These results, together with the knowledge of thiacalixarene/metal nanoclusters, suggest promising applications for thiacalixarenes in biomaterials and MOF fabrication.

Legend

Protein

Chemical

Disease

Primary Citation of related structures