ISDA

Deposition Date 2021-08-09

Release Date 2022-08-24

Last Version Date 2024-11-20

Entry Detail

PDB ID:

7PDY

Keywords:

IMMUNE SYSTEM

Title:

A viral peptide from Marek's disease virus bound to chicken MHC-II molecule

Biological Source:

Source Organism:

Gallus gallus (Taxon ID: 9031)
Marek's disease herpesvirus (strain MD11/75C/R2) (Taxon ID: 31527)

Host Organism:

Trichoplusia ni

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.54 Å

R-Value Free:

0.25

R-Value Work:

0.21

R-Value Observed:

0.21

Space Group:

P 32 2 1

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:MHC class II alpha chain
Gene (Uniprot):B-LA
Chain IDs:A, C, E
Chain Length:191
Number of Molecules:3
Biological Source:Gallus gallus

UniProt ID:Q4U5Z6 Pfam ID:PF00993, PF07654

Protein Blast

Polymer Type:polypeptide(L)
Molecule:38 kDa phosphoprotein,MHC class II beta chain
Gene (Uniprot):PP38, B-LB
Chain IDs:B, D, F
Chain Length:225
Number of Molecules:3
Biological Source:Marek's disease herpesvirus (strain MD11/75C/R2), Gallus gallus

UniProt ID:P68348,Q4U5Z9 Pfam ID:PF00969, PF07654

Ligand Molecules