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Entry Detail
PDB ID:
7PDB
Title:
Crystal structure of Lymnaea stagnalis Acetylcholine-binding protein (Ls-AChBP) Q55R/M114V double mutant complexed with Flupyradifurone
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2021-08-05
Release Date:
2022-02-02
Method Details:
Experimental Method:
Resolution:
2.33 Å
R-Value Free:
0.25
R-Value Work:
0.22
Space Group:
P 65
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Acetylcholine-binding protein
Mutations:Q55R, N66D, M114V
Chain IDs:A (auth: AaA), B (auth: BaB), C (auth: CaC), D (auth: DaD), E (auth: EaE)
Chain Length:210
Number of Molecules:5
Biological Source:Lymnaea stagnalis
Ligand Molecules
Primary Citation
Structural Biology-Guided Design, Synthesis, and Biological Evaluation of Novel Insect Nicotinic Acetylcholine Receptor Orthosteric Modulators.
J.Med.Chem. 65 2297 2312 (2022)
PMID: 34986308 DOI: 10.1021/acs.jmedchem.1c01767

Abstact

The development of novel and safe insecticides remains an important need for a growing world population to protect crops and animal and human health. New chemotypes modulating the insect nicotinic acetylcholine receptors have been recently brought to the agricultural market, yet with limited understanding of their molecular interactions at their target receptor. Herein, we disclose the first crystal structures of these insecticides, namely, sulfoxaflor, flupyradifurone, triflumezopyrim, flupyrimin, and the experimental compound, dicloromezotiaz, in a double-mutated acetylcholine-binding protein which mimics the insect-ion-channel orthosteric site. Enabled by these findings, we discovered novel pharmacophores with a related mode of action, and we describe herein their design, synthesis, and biological evaluation.

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