7PC0 image
Entry Detail
PDB ID:
7PC0
EMDB ID:
Title:
GABA-A receptor bound by a-Cobratoxin
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2021-08-03
Release Date:
2022-02-09
Method Details:
Experimental Method:
Resolution:
3.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Gamma-aminobutyric acid receptor subunit alpha-1
Chain IDs:B (auth: A)
Chain Length:368
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Gamma-aminobutyric acid receptor subunit beta-3
Chain IDs:C (auth: B), D (auth: C), E
Chain Length:451
Number of Molecules:3
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Gamma-aminobutyric acid receptor subunit alpha-1
Chain IDs:F (auth: D)
Chain Length:411
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Megabody 25
Chain IDs:A (auth: F)
Chain Length:522
Number of Molecules:1
Biological Source:Lama glama
Polymer Type:polypeptide(L)
Description:Alpha-cobratoxin
Chain IDs:G (auth: K), H (auth: L)
Chain Length:71
Number of Molecules:2
Biological Source:Naja kaouthia
Primary Citation
Mechanisms of inhibition and activation of extrasynaptic alpha beta GABA A receptors.
Nature 602 529 533 (2022)
PMID: 35140402 DOI: 10.1038/s41586-022-04402-z

Abstact

Type A GABA (γ-aminobutyric acid) receptors represent a diverse population in the mammalian brain, forming pentamers from combinations of α-, β-, γ-, δ-, ε-, ρ-, θ- and π-subunits1. αβ, α4βδ, α6βδ and α5βγ receptors favour extrasynaptic localization, and mediate an essential persistent (tonic) inhibitory conductance in many regions of the mammalian brain1,2. Mutations of these receptors in humans are linked to epilepsy and insomnia3,4. Altered extrasynaptic receptor function is implicated in insomnia, stroke and Angelman and Fragile X syndromes1,5, and drugs targeting these receptors are used to treat postpartum depression6. Tonic GABAergic responses are moderated to avoid excessive suppression of neuronal communication, and can exhibit high sensitivity to Zn2+ blockade, in contrast to synapse-preferring α1βγ, α2βγ and α3βγ receptor responses5,7-12. Here, to resolve these distinctive features, we determined structures of the predominantly extrasynaptic αβ GABAA receptor class. An inhibited state bound by both the lethal paralysing agent α-cobratoxin13 and Zn2+ was used in comparisons with GABA-Zn2+ and GABA-bound structures. Zn2+ nullifies the GABA response by non-competitively plugging the extracellular end of the pore to block chloride conductance. In the absence of Zn2+, the GABA signalling response initially follows the canonical route until it reaches the pore. In contrast to synaptic GABAA receptors, expansion of the midway pore activation gate is limited and it remains closed, reflecting the intrinsic low efficacy that characterizes the extrasynaptic receptor. Overall, this study explains distinct traits adopted by αβ receptors that adapt them to a role in tonic signalling.

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