7PBJ image
Deposition Date 2021-08-02
Release Date 2021-11-24
Last Version Date 2024-07-17
Entry Detail
PDB ID:
7PBJ
Keywords:
Title:
Cryo-EM structure of the GroEL-GroES complex with ADP bound to both rings ("wide" conformation).
Biological Source:
Method Details:
Experimental Method:
Resolution:
3.40 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:60 kDa chaperonin
Gene (Uniprot):groEL
Chain IDs:A (auth: Ad), B (auth: Ae), D (auth: Ak), E (auth: Al), G (auth: Ar), H (auth: As), J (auth: Ay), K (auth: Az), M (auth: Bf), N (auth: Bg), P (auth: Bm), Q (auth: Bn), S (auth: Bt), T (auth: Bu)
Chain Length:524
Number of Molecules:14
Biological Source:Escherichia coli (strain K12)
Polymer Type:polypeptide(L)
Molecule:10 kDa chaperonin
Gene (Uniprot):groES
Chain IDs:C (auth: Af), F (auth: Am), I (auth: At), L (auth: Ba), O (auth: Bh), R (auth: Bo), U (auth: Bv)
Chain Length:97
Number of Molecules:7
Biological Source:Escherichia coli (strain K12)
Primary Citation
Novel cryo-EM structure of an ADP-bound GroEL-GroES complex.
Sci Rep 11 18241 18241 (2021)
PMID: 34521893 DOI: 10.1038/s41598-021-97657-x

Abstact

The GroEL-GroES chaperonin complex is a bacterial protein folding system, functioning in an ATP-dependent manner. Upon ATP binding and hydrolysis, it undergoes multiple stages linked to substrate protein binding, folding and release. Structural methods helped to reveal several conformational states and provide more information about the chaperonin functional cycle. Here, using cryo-EM we resolved two nucleotide-bound structures of the bullet-shaped GroEL-GroES1 complex at 3.4 Å resolution. The main difference between them is the relative orientation of their apical domains. Both structures contain nucleotides in cis and trans GroEL rings; in contrast to previously reported bullet-shaped complexes where nucleotides were only present in the cis ring. Our results suggest that the bound nucleotides correspond to ADP, and that such a state appears at low ATP:ADP ratios.

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