7PBH image
Deposition Date 2021-08-02
Release Date 2022-08-10
Last Version Date 2024-02-21
Entry Detail
PDB ID:
7PBH
Keywords:
Title:
Structural characterization of Thorarchaeota profilin indicates a eukaryotic-like fold but with an extended N-terminus
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
100
Conformers Submitted:
20
Selection Criteria:
target function
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Profilin
Gene (Uniprot):EU537_07650
Chain IDs:A
Chain Length:145
Number of Molecules:1
Biological Source:Candidatus Thorarchaeota
Ligand Molecules
Primary Citation
Structural Characterization of a Thorarchaeota Profilin Indicates Eukaryotic-Like Features but with an Extended N-Terminus.
Adv Biol (Weinh) 6 e2101323 e2101323 (2022)
PMID: 35429148 DOI: 10.1002/adbi.202101323

Abstact

The emergence of the first eukaryotic cell is preceded by evolutionary events, which are still highly debatable. Clues of the exact sequence of events are beginning to emerge. Recent metagenomics analyses has uncovered the Asgard super-phylum as the closest yet known archaea host of eukaryotes. Some of these have been tested and confirmed experimentally. However, the bulk of eukaryotic signature proteins predicted to be encoded by the Asgard super-phylum have not been studied, and their true functions, at least in the context of a eukaryotic cell, are still elusive. For example, there are several different variants of the profilin within each Asgardian Achaea, and there are some conflicting results of their actual roles. Here, the 3D structure of profilin from Thorarchaeota is determined by nuclear magnetic resonance spectroscopy and shows that this profilin has a eukaryotic-like profilin with a rigid core and an extended N-terminus previously implicated in polyproline binding. In addition, it is also shown that Thorarchaeota Profilin co-localizes with eukaryotic actin in cultured HeLa cells. This finding reaffirms the notion that Asgardian encoded proteins possess eukaryotic-like characteristics and strengthen the likely existence of a complex cytoskeleton already in a last eukaryotic common ancestor.

Legend

Protein

Chemical

Disease

Primary Citation of related structures