7P8B image
Deposition Date 2021-07-21
Release Date 2021-10-20
Last Version Date 2024-02-07
Entry Detail
PDB ID:
7P8B
Keywords:
RNA BINDING PROTEIN
Title:
Crystal structure of YTHDC1 with compound YLI_DC1_006
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
1.20 Å
R-Value Free:
0.21
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 1 21 1
7P8B validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:YTH domain-containing protein 1
Gene (Uniprot):YTHDC1
Chain IDs:A, B
Chain Length:183
Number of Molecules:2
Biological Source:Homo sapiens
UniProt ID:Q96MU7 Pfam ID:PF04146
Ligand Molecules
OYT
SO4
Primary Citation
Structure-based design of ligands of the m6A-RNA reader YTHDC1
Eur J Med Chem Rep 5 100057 ? (2022)
DOI: 10.1016/j.ejmcr.2022.100057
Primary Citation of related structures
7P8B