7P3R image
Entry Detail
PDB ID:
7P3R
EMDB ID:
Keywords:
Title:
Helical structure of the toxin MakA from Vibrio cholera
Biological Source:
PDB Version:
Deposition Date:
2021-07-08
Release Date:
2022-02-23
Method Details:
Experimental Method:
Resolution:
3.65 Å
Aggregation State:
HELICAL ARRAY
Reconstruction Method:
HELICAL
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:MakA tetramer
Chain IDs:A, B, C, D
Chain Length:369
Number of Molecules:4
Biological Source: Vibrio cholerae O1 biovar El Tor str. N16961
Ligand Molecules
Primary Citation
Protein-lipid interaction at low pH induces oligomerization of the MakA cytotoxin from Vibrio cholerae .
Elife 11 ? ? (2022)
PMID: 35131030 DOI: 10.7554/eLife.73439

Abstact

The α-pore-forming toxins (α-PFTs) from pathogenic bacteria damage host cell membranes by pore formation. We demonstrate a remarkable, hitherto unknown mechanism by an α-PFT protein from Vibrio cholerae. As part of the MakA/B/E tripartite toxin, MakA is involved in membrane pore formation similar to other α-PFTs. In contrast, MakA in isolation induces tube-like structures in acidic endosomal compartments of epithelial cells in vitro. The present study unravels the dynamics of tubular growth, which occurs in a pH-, lipid-, and concentration-dependent manner. Within acidified organelle lumens or when incubated with cells in acidic media, MakA forms oligomers and remodels membranes into high-curvature tubes leading to loss of membrane integrity. A 3.7 Å cryo-electron microscopy structure of MakA filaments reveals a unique protein-lipid superstructure. MakA forms a pinecone-like spiral with a central cavity and a thin annular lipid bilayer embedded between the MakA transmembrane helices in its active α-PFT conformation. Our study provides insights into a novel tubulation mechanism of an α-PFT protein and a new mode of action by a secreted bacterial toxin.

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Primary Citation of related structures