ISDA

Deposition Date 2021-06-29

Release Date 2022-06-15

Last Version Date 2024-11-20

Entry Detail

PDB ID:

7P0I

Keywords:

MEMBRANE PROTEIN

Title:

Crystal structure of a CGRP receptor ectodomain heterodimer bound to macrocyclic inhibitor Compound 13

Biological Source:

Source Organism:

Escherichia coli (strain K12) (Taxon ID: 83333)
Homo sapiens (Taxon ID: 9606)

Host Organism:

Homo sapiens

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.30 Å

R-Value Free:

0.25

R-Value Work:

0.19

R-Value Observed:

0.19

Space Group:

P 21 21 21

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Maltose/maltodextrin-binding periplasmic protein,Receptor activity-modifying protein 1,Calcitonin gene-related peptide type 1 receptor
Gene (Uniprot):RAMP1, malE, CALCRL
Chain IDs:A
Chain Length:594
Number of Molecules:1
Biological Source:Escherichia coli (strain K12), Homo sapiens

UniProt ID:P0AEX9,O60894,Q16602 Pfam ID:PF01547, PF04901, PF02793 EC:7.5.2.1

Ligand Molecules

7IU

PG4

Peptide-like Molecules

PRD_900001

Primary Citation

Novel Macrocyclic Antagonists of the Calcitonin Gene-Related Peptide Receptor: Design, Realization, and Structural Characterization of Protein-Ligand Complexes.

Cansfield, A.D, Ator, M.A, Banerjee, J, Bestwick, M, Bortolato, A, Brown, G.A, Brown, J, Butkovic, K, Cansfield, J.E, Christopher, J.A, Congreve, M, Cseke, G, Deflorian, F, Dugan, B, Hunjadi, M.P, Hutinec, A, Inturi, T.K, Landek, G, Mason, J, O'Brien, A, Ott, G.R, Rupcic, R, Saxty, G, Southall, S.M, Zadravec, R, Watson, S.P.Show

Acs Chem Neurosci 13 751 765 (2022)

PMID: 35245037 DOI: 10.1021/acschemneuro.1c00696

Abstact

A series of macrocyclic calcitonin gene-related peptide (CGRP) receptor antagonists identified using structure-based design principles, exemplified by HTL0028016 (1) and HTL0028125 (2), is described. Structural characterization by X-ray crystallography of the interaction of two of the macrocycle antagonists with the CGRP receptor ectodomain is described, along with structure-activity relationships associated with point changes to the macrocyclic antagonists. The identification of non-peptidic/natural product-derived, macrocyclic ligands for a G protein coupled receptor (GPCR) is noteworthy.

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Primary Citation of related structures