7OZ4 image
Deposition Date 2021-06-25
Release Date 2021-11-17
Last Version Date 2024-07-17
Entry Detail
PDB ID:
7OZ4
Keywords:
Title:
Mature capsid of bacteriophage phiRSA1
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
3.90 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:p2 family phage major capsid protein
Chain IDs:A, B (auth: G), C (auth: F), D (auth: B), E, F (auth: C), G (auth: D)
Chain Length:339
Number of Molecules:7
Biological Source:Ralstonia virus RSA1
Ligand Molecules
Primary Citation
High Resolution Structure of the Mature Capsid of Ralstonia solanacearum Bacteriophage phi RSA1 by Cryo-Electron Microscopy.
Int J Mol Sci 22 ? ? (2021)
PMID: 34681713 DOI: 10.3390/ijms222011053

Abstact

The ϕRSA1 bacteriophage has been isolated from Ralstonia solanacearum, a gram negative bacteria having a significant economic impact on many important crops. We solved the three-dimensional structure of the ϕRSA1 mature capsid to 3.9 Å resolution by cryo-electron microscopy. The capsid shell, that contains the 39 kbp of dsDNA genome, has an icosahedral symmetry characterized by an unusual triangulation number of T = 7, dextro. The ϕRSA1 capsid is composed solely of the polymerization of the major capsid protein, gp8, which exhibits the typical "Johnson" fold first characterized in E. coli bacteriophage HK97. As opposed to the latter, the ϕRSA1 mature capsid is not stabilized by covalent crosslinking between its subunits, nor by the addition of a decoration protein. We further describe the molecular interactions occurring between the subunits of the ϕRSA1 capsid and their relationships with the other known bacteriophages.

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Primary Citation of related structures