7OYI image
Deposition Date 2021-06-24
Release Date 2022-07-06
Last Version Date 2024-01-31
Entry Detail
PDB ID:
7OYI
Title:
Escherichia coli YtfE_E159L(MN)
Biological Source:
Method Details:
Experimental Method:
Resolution:
1.86 Å
R-Value Free:
0.20
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Iron-sulfur cluster repair protein YtfE
Gene (Uniprot):ytfE
Mutations:C30A, C31A, E159L
Chain IDs:A, B
Chain Length:219
Number of Molecules:2
Biological Source:Escherichia coli (strain K12)
Primary Citation
Repair of Iron Center Proteins-A Different Class of Hemerythrin-like Proteins.
Molecules 27 ? ? (2022)
PMID: 35807291 DOI: 10.3390/molecules27134051

Abstact

Repair of Iron Center proteins (RIC) form a family of di-iron proteins that are widely spread in the microbial world. RICs contain a binuclear nonheme iron site in a four-helix bundle fold, two basic features of hemerythrin-like proteins. In this work, we review the data on microbial RICs including how their genes are regulated and contribute to the survival of pathogenic bacteria. We gathered the currently available biochemical, spectroscopic and structural data on RICs with a particular focus on Escherichia coli RIC (also known as YtfE), which remains the best-studied protein with extensive biochemical characterization. Additionally, we present novel structural data for Escherichia coli YtfE harboring a di-manganese site and the protein's affinity for this metal. The networking of protein interactions involving YtfE is also described and integrated into the proposed physiological role as an iron donor for reassembling of stress-damaged iron-sulfur centers.

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