ISDA: 7OYG

Deposition Date 2021-06-24

Release Date 2021-08-25

Last Version Date 2024-07-17

Entry Detail

PDB ID:

7OYG

Keywords:

VIRAL PROTEIN

Title:

Dimeric form of SARS-CoV-2 RNA-dependent RNA polymerase

Biological Source:

Source Organism:

Severe acute respiratory syndrome coronavirus 2 (Taxon ID: 2697049)

Host Organism:

Trichoplusia ni

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

5.50 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

Download Validation Report

Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:SARS-CoV-2 RNA-dependent RNA polymerase (nsp12)
Gene (Uniprot):rep
Chain IDs:A, F (auth: D)
Chain Length:935
Number of Molecules:2
Biological Source:Severe acute respiratory syndrome coronavirus 2

UniProt ID:P0DTD1 Pfam ID:PF00680, PF08717, PF08716, PF06478 EC:2.7.7.48

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:SARS-CoV-2 nsp8
Gene (Uniprot):rep
Chain IDs:B, G (auth: E)
Chain Length:201
Number of Molecules:2
Biological Source:Severe acute respiratory syndrome coronavirus 2

UniProt ID:P0DTD1 Pfam ID:PF00680, PF08717, PF08716, PF06478 EC:2.7.7.48

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:SARS-CoV-2 nsp7
Gene (Uniprot):rep
Chain IDs:C, H (auth: F)
Chain Length:86
Number of Molecules:2
Biological Source:Severe acute respiratory syndrome coronavirus 2

UniProt ID:P0DTD1 Pfam ID:PF00680, PF08717, PF08716, PF06478 EC:2.7.7.48

Polymer Type:polyribonucleotide
Molecule:RNA (5'-R(P*CP*UP*AP*CP*GP*CP*AP*GP*UP*G)-3')
Chain IDs:D (auth: P), I (auth: G)
Chain Length:15
Number of Molecules:2
Biological Source:Severe acute respiratory syndrome coronavirus 2

Polymer Type:polyribonucleotide
Molecule:RNA (5'-R(P*UP*GP*CP*AP*CP*UP*GP*CP*GP*UP*AP*G)-3')
Chain IDs:E (auth: T), J (auth: H)
Chain Length:57
Number of Molecules:2
Biological Source:Severe acute respiratory syndrome coronavirus 2

Ligand Molecules

Primary Citation

The structure of a dimeric form of SARS-CoV-2 polymerase

Jochheim, F.A, Tegunov, D, Hillen, H.S, Schmitzova, J, Kokic, G, Dienemann, C, Cramer, P.Show

Communications Biology 4 999 ? (2021)

DOI: 10.1038/s42003-021-02529-9

Primary Citation of related structures

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