ISDA

7OW7 image

Entry Detail

PDB ID:

7OW7

EMDB ID:

Keywords:

Title:

EIF6-bound large subunit of the human ribosome

Biological Source:

Source Organism:

PDB Version:

Deposition Date:

2021-06-16

Release Date:

2022-10-05

Method Details:

Experimental Method:

ELECTRON MICROSCOPY

Resolution:

2.40 Å

Aggregation State:

PARTICLE

Reconstruction Method:

SINGLE PARTICLE

7OW7 validation report

Download Validation Report

Macromolecular Entities

Polymer Type:polyribonucleotide
Description:28S rRNA
Chain IDs:A
Chain Length:5070
Number of Molecules:1
Biological Source:Homo sapiens

Polymer Type:polyribonucleotide
Description:5S rRNA
Chain IDs:B
Chain Length:123
Number of Molecules:1
Biological Source:Homo sapiens

Polymer Type:polyribonucleotide
Description:5.8S ribosomal RNA
Chain IDs:C
Chain Length:105
Number of Molecules:1
Biological Source:Homo sapiens

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L8
Chain IDs:D
Chain Length:257
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P62917 Pfam ID:PF00181, PF03947

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L3 isoform a
Chain IDs:E
Chain Length:70
Number of Molecules:1
Biological Source:Homo sapiens

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L4
Chain IDs:F
Chain Length:427
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P36578 Pfam ID:PF00573, PF14374

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L5
Chain IDs:G
Chain Length:297
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P46777 Pfam ID:PF17144, PF14204

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L6
Chain IDs:H
Chain Length:288
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q02878 Pfam ID:PF03868, PF01159

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L13a
Chain IDs:Q (auth: I)
Chain Length:106
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P40429 Pfam ID:PF00572

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L17
Chain IDs:R (auth: J)
Chain Length:184
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P18621 Pfam ID:PF00237

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L18
Chain IDs:S (auth: K)
Chain Length:137
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q07020 Pfam ID:PF17135

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L19
Chain IDs:T (auth: L)
Chain Length:196
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P84098 Pfam ID:PF01280

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L18a
Chain IDs:U (auth: M)
Chain Length:176
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q02543 Pfam ID:PF01775

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L21
Chain IDs:V (auth: N)
Chain Length:160
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P46778 Pfam ID:PF01157

Protein Blast

Polymer Type:polypeptide(L)
Description:Eukaryotic translation initiation factor 6
Chain IDs:OA (auth: P)
Chain Length:245
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P56537 Pfam ID:PF01912

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L23
Chain IDs:PA (auth: Q)
Chain Length:140
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P62829 Pfam ID:PF00238

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L23a
Chain IDs:W (auth: R)
Chain Length:211
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P62750 Pfam ID:PF03939, PF00276

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L26
Chain IDs:X (auth: S)
Chain Length:220
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P61254 Pfam ID:PF16906, PF00467

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L27
Chain IDs:Y (auth: T)
Chain Length:136
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P61353 Pfam ID:PF00467, PF01777

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L27a
Chain IDs:Z (auth: U)
Chain Length:148
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P46776 Pfam ID:PF00828

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L29
Chain IDs:AA (auth: V)
Chain Length:159
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P47914 Pfam ID:PF01779

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L30
Chain IDs:BA (auth: W)
Chain Length:115
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P62888 Pfam ID:PF01248

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L31
Chain IDs:CA (auth: X)
Chain Length:125
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P62899 Pfam ID:PF01198

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L32
Chain IDs:DA (auth: Y)
Chain Length:135
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P62910 Pfam ID:PF01655

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L35a
Chain IDs:EA (auth: Z)
Chain Length:110
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P18077 Pfam ID:PF01247

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L34
Chain IDs:FA (auth: a)
Chain Length:5070
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P49207 Pfam ID:PF01199

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L35
Chain IDs:GA (auth: b)
Chain Length:123
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P42766 Pfam ID:PF00831

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L36
Chain IDs:HA (auth: c)
Chain Length:105
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q9Y3U8 Pfam ID:PF01158

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L37
Chain IDs:IA (auth: d)
Chain Length:257
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P61927 Pfam ID:PF01907

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L38
Chain IDs:JA (auth: e)
Chain Length:70
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P63173 Pfam ID:PF01781

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L39
Chain IDs:KA (auth: f)
Chain Length:427
Number of Molecules:1
Biological Source:Homo sapiens

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L36a
Chain IDs:LA (auth: i)
Chain Length:106
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P83881 Pfam ID:PF00935

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L37a
Chain IDs:MA (auth: j)
Chain Length:184
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P61513 Pfam ID:PF01780

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L28
Chain IDs:NA (auth: k)
Chain Length:137
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P46779 Pfam ID:PF01778

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L7
Chain IDs:I (auth: m)
Chain Length:176
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P18124 Pfam ID:PF08079, PF00327

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L7a
Chain IDs:J (auth: n)
Chain Length:160
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P62424 Pfam ID:PF01248

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L9
Chain IDs:K (auth: o)
Chain Length:190
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P32969 Pfam ID:PF00347

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L10-like
Chain IDs:L (auth: p)
Chain Length:245
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q96L21 Pfam ID:PF00252

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L11
Chain IDs:M (auth: q)
Chain Length:140
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P62913 Pfam ID:PF00281, PF00673

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L13
Chain IDs:N (auth: r)
Chain Length:211
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P26373 Pfam ID:PF01294

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L14
Chain IDs:O (auth: s)
Chain Length:220
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q6IPH7 Pfam ID:PF01929

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L15
Chain IDs:P (auth: t)
Chain Length:136
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P61313 Pfam ID:PF00827

Protein Blast

Polymer Type:polypeptide(L)
Description:60S ribosomal protein L24
Chain IDs:QA (auth: u)
Chain Length:148
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P83731 Pfam ID:PF01246

Ligand Molecules

BR

K

MG

NA

ZN

Primary Citation

Structure of human EIF6-bound large ribosomal subunit

Faille, A, Warren, A.J.Show

To Be Published ? ? ? (?)

Primary Citation of related structures

7OW7