7OOG image
Entry Detail
PDB ID:
7OOG
Keywords:
Title:
Plasmodium falciparum Hsp70-x chaperone nucleotide binding domain in complex with NCL-00023823
Biological Source:
PDB Version:
Deposition Date:
2021-05-27
Release Date:
2021-06-02
Method Details:
Experimental Method:
Resolution:
2.42 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Heat shock protein 70
Chain IDs:A, B
Chain Length:393
Number of Molecules:2
Biological Source:Plasmodium falciparum (isolate 3D7)
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CSX A CYS modified residue
Primary Citation
Structures of the Plasmodium falciparum heat-shock protein 70-x ATPase domain in complex with chemical fragments identify conserved and unique binding sites.
Acta Crystallogr.,Sect.F 77 262 268 (2021)
PMID: 34341192 DOI: 10.1107/S2053230X21007378

Abstact

Plasmodium falciparum invades erythrocytes and extensively modifies them in a manner that increases the virulence of this malaria parasite. A single heat-shock 70 kDa-type chaperone, PfHsp70-x, is among the parasite proteins exported to the host cell. PfHsp70-x assists in the formation of a key protein complex that underpins parasite virulence and supports parasite growth during febrile episodes. Previous work resolved the crystallographic structures of the PfHsp70-x ATPase and substrate-binding domains, and showed them to be highly similar to those of their human counterparts. Here, 233 chemical fragments were screened for binding to the PfHsp70-x ATPase domain, resulting in three crystallographic structures of this domain in complex with ligands. Two binding sites were identified, with most ligands binding proximal to the ATPase nucleotide-binding pocket. Although amino acids participating in direct ligand interactions are conserved between the parasite and human erythrocytic chaperones, one nonconserved residue is also present near the ligand. This work suggests that PfHsp70-x features binding sites that may be exploitable by small-molecule ligands towards the specific inhibition of the parasite chaperone.

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Primary Citation of related structures