7ONS image
Entry Detail
PDB ID:
7ONS
Keywords:
Title:
PARP1 catalytic domain in complex with isoquinolone-based inhibitor (compound 16)
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2021-05-25
Release Date:
2021-09-15
Method Details:
Experimental Method:
Resolution:
1.97 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Poly [ADP-ribose] polymerase 1
Mutations:V762A
Chain IDs:A, B
Chain Length:352
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Discovery of 5-{4-[(7-Ethyl-6-oxo-5,6-dihydro-1,5-naphthyridin-3-yl)methyl]piperazin-1-yl}- N -methylpyridine-2-carboxamide (AZD5305): A PARP1-DNA Trapper with High Selectivity for PARP1 over PARP2 and Other PARPs.
J.Med.Chem. 64 14498 14512 (2021)
PMID: 34570508 DOI: 10.1021/acs.jmedchem.1c01012

Abstact

Poly-ADP-ribose-polymerase (PARP) inhibitors have achieved regulatory approval in oncology for homologous recombination repair deficient tumors including BRCA mutation. However, some have failed in combination with first-line chemotherapies, usually due to overlapping hematological toxicities. Currently approved PARP inhibitors lack selectivity for PARP1 over PARP2 and some other 16 PARP family members, and we hypothesized that this could contribute to toxicity. Recent literature has demonstrated that PARP1 inhibition and PARP1-DNA trapping are key for driving efficacy in a BRCA mutant background. Herein, we describe the structure- and property-based design of 25 (AZD5305), a potent and selective PARP1 inhibitor and PARP1-DNA trapper with excellent in vivo efficacy in a BRCA mutant HBCx-17 PDX model. Compound 25 is highly selective for PARP1 over other PARP family members, with good secondary pharmacology and physicochemical properties and excellent pharmacokinetics in preclinical species, with reduced effects on human bone marrow progenitor cells in vitro.

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