7OFN image
Deposition Date 2021-05-05
Release Date 2021-12-29
Last Version Date 2024-06-19
Entry Detail
PDB ID:
7OFN
Title:
NMR solution structure of the SYLF domain of Burkholderia pseudomallei BPSL1445
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Conformers Calculated:
40
Conformers Submitted:
10
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Lipoprotein
Chain IDs:A
Chain Length:163
Number of Molecules:1
Biological Source:Burkholderia pseudomallei
Ligand Molecules
Primary Citation
Solution Structure of the BPSL1445 Protein of Burkholderia pseudomallei Reveals the SYLF Domain Three-Dimensional Fold.
Acs Chem.Biol. 17 230 239 (2022)
PMID: 34968022 DOI: 10.1021/acschembio.1c00886

Abstact

The SYLF domain is an evolutionary conserved protein domain with phosphatidylinositol binding ability, whose three-dimensional structure is unknown. Here, we present the solution structure and the dynamics characterization of the SYLF domain of the bacterial BPSL1445 protein. BPSL1445 is a seroreactive antigen and a diagnostic marker of Burkholderia pseudomallei, the etiological agent of melioidosis, a severe infectious disease in the tropics. The BPSL1445 SYLF domain (BPSL1445-SYLF) consists of a β-barrel core, with two flexible loops protruding out of the barrel and three helices packing on its surface. Our structure allows for a more precise definition of the boundaries of the SYLF domain compared to the previously reported one and suggests common ancestry with bacterial EipA domains. We also demonstrate by phosphatidyl-inositol phosphate arrays and nuclear magnetic resonance titrations that BPSL1445-SYLF weakly interacts with phosphoinositides, thus supporting lipid binding abilities of this domain also in prokaryotes.

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Disease

Primary Citation of related structures