7OD0 image
Deposition Date 2021-04-28
Release Date 2021-08-04
Last Version Date 2024-11-13
Entry Detail
PDB ID:
7OD0
Keywords:
Title:
Mirolysin in complex with compound 9
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.23
R-Value Work:
0.20
Space Group:
P 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Mirolysin
Chain IDs:A (auth: AAA), B (auth: BBB), C (auth: CCC), D (auth: DDD), E (auth: EEE), F (auth: FFF)
Chain Length:277
Number of Molecules:6
Biological Source:Tannerella forsythia
Primary Citation
Latency, thermal stability, and identification of an inhibitory compound of mirolysin, a secretory protease of the human periodontopathogen Tannerella forsythia .
J Enzyme Inhib Med Chem 36 1267 1281 (2021)
PMID: 34210221 DOI: 10.1080/14756366.2021.1937619

Abstact

Mirolysin is a secretory protease of Tannerella forsythia, a member of the dysbiotic oral microbiota responsible for periodontitis. In this study, we show that mirolysin latency is achieved by a "cysteine-switch" mechanism exerted by Cys23 in the N-terminal profragment. Mutation of Cys23 shortened the time needed for activation of the zymogen from several days to 5 min. The mutation also decreased the thermal stability and autoproteolysis resistance of promirolysin. Mature mirolysin is a thermophilic enzyme and shows optimal activity at 65 °C. Through NMR-based fragment screening, we identified a small molecule (compound (cpd) 9) that blocks promirolysin maturation and functions as a competitive inhibitor (Ki = 3.2 µM), binding to the S1' subsite of the substrate-binding pocket. Cpd 9 shows superior specificity and does not interact with other T. forsythia proteases or Lys/Arg-specific proteases.

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Primary Citation of related structures
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