7OCI image
Entry Detail
PDB ID:
7OCI
EMDB ID:
Title:
Cryo-EM structure of yeast Ost6p containing oligosaccharyltransferase complex
Biological Source:
PDB Version:
Deposition Date:
2021-04-27
Release Date:
2022-02-16
Method Details:
Experimental Method:
Resolution:
3.46 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1
Chain IDs:A
Chain Length:476
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C
Polymer Type:polypeptide(L)
Description:Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2
Chain IDs:B
Chain Length:130
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C
Polymer Type:polypeptide(L)
Description:Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST6
Chain IDs:C
Chain Length:332
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C
Polymer Type:polypeptide(L)
Description:Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST4
Chain IDs:D
Chain Length:36
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C
Polymer Type:polypeptide(L)
Description:Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST5
Chain IDs:E
Chain Length:86
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C
Polymer Type:polypeptide(L)
Description:Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3
Chain IDs:F
Chain Length:718
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C
Polymer Type:polypeptide(L)
Description:Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit WBP1
Chain IDs:G
Chain Length:430
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C
Polymer Type:polypeptide(L)
Description:Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit SWP1
Chain IDs:H
Chain Length:286
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C
Polymer Type:polypeptide(L)
Description:Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST6 - TM1
Chain IDs:I
Chain Length:24
Number of Molecules:1
Biological Source:Saccharomyces cerevisiae S288C
Primary Citation
Functional analysis of Ost3p and Ost6p containing yeast oligosaccharyltransferases.
Glycobiology 31 1604 1615 (2021)
PMID: 34974622 DOI: 10.1093/glycob/cwab084

Abstact

The oligosaccharyltransferase (OST) is the central enzyme in the N-glycosylation pathway. It transfers a defined oligosaccharide from a lipid-linker onto the asparagine side chain of proteins. The yeast OST consists of eight subunits and exists in two catalytically distinct isoforms that differ in one subunit, Ost3p or Ost6p. The cryo-electron microscopy structure of the Ost6p containing complex was found to be highly similar to the Ost3p containing OST. OST enzymes with altered Ost3p/Ost6p subunits were generated and functionally analyzed. The three C-terminal transmembrane helices were responsible for the higher turnover-rate of the Ost3p vs. the Ost6p containing enzyme in vitro and the more severe hypoglycosylation in Ost3p lacking strains in vivo. Glycosylation of specific OST target sites required the N-terminal thioredoxin domain of Ost3p or Ost6p. This Ost3p/Ost6p dependence was glycosylation site but not protein specific. We concluded that the Ost3p/Ost6p subunits modulate the catalytic activity of OST and provide additional specificity for OST substrate recognition.

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