7O0N image
Deposition Date 2021-03-26
Release Date 2021-09-15
Last Version Date 2024-01-31
Entry Detail
PDB ID:
7O0N
Keywords:
Title:
Crystal structure of a ParB E93A mutant from Myxococcus xanthus bound to CDP and monothiophosphate
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.89 Å
R-Value Free:
0.21
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:ParB family protein
Gene (Uniprot):parB
Chain IDs:A, B
Chain Length:212
Number of Molecules:2
Biological Source:Myxococcus xanthus (strain DK1622)
Primary Citation
The CTPase activity of ParB determines the size and dynamics of prokaryotic DNA partition complexes.
Mol.Cell 81 3992 ? (2021)
PMID: 34562373 DOI: 10.1016/j.molcel.2021.09.004

Abstact

ParB-like CTPases mediate the segregation of bacterial chromosomes and low-copy number plasmids. They act as DNA-sliding clamps that are loaded at parS motifs in the centromere of target DNA molecules and spread laterally to form large nucleoprotein complexes serving as docking points for the DNA segregation machinery. Here, we solve crystal structures of ParB in the pre- and post-hydrolysis state and illuminate the catalytic mechanism of nucleotide hydrolysis. Moreover, we identify conformational changes that underlie the CTP- and parS-dependent closure of ParB clamps. The study of CTPase-deficient ParB variants reveals that CTP hydrolysis serves to limit the sliding time of ParB clamps and thus drives the establishment of a well-defined ParB diffusion gradient across the centromere whose dynamics are critical for DNA segregation. These findings clarify the role of the ParB CTPase cycle in partition complex assembly and function and thus advance our understanding of this prototypic CTP-dependent molecular switch.

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