7NVJ image
Entry Detail
PDB ID:
7NVJ
Keywords:
Title:
Crystal structure of UFC1 Y110A & F121A
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2021-03-15
Release Date:
2021-09-29
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.24
R-Value Work:
0.19
Space Group:
P 41 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Ubiquitin-fold modifier-conjugating enzyme 1
Mutations:Y110A, F121A
Chain IDs:A (auth: AAA)
Chain Length:168
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structural basis for UFM1 transfer from UBA5 to UFC1.
Nat Commun 12 5708 5708 (2021)
PMID: 34588452 DOI: 10.1038/s41467-021-25994-6

Abstact

Ufmylation is a post-translational modification essential for regulating key cellular processes. A three-enzyme cascade involving E1, E2 and E3 is required for UFM1 attachment to target proteins. How UBA5 (E1) and UFC1 (E2) cooperatively activate and transfer UFM1 is still unclear. Here, we present the crystal structure of UFC1 bound to the C-terminus of UBA5, revealing how UBA5 interacts with UFC1 via a short linear sequence, not observed in other E1-E2 complexes. We find that UBA5 has a region outside the adenylation domain that is dispensable for UFC1 binding but critical for UFM1 transfer. This region moves next to UFC1's active site Cys and compensates for a missing loop in UFC1, which exists in other E2s and is needed for the transfer. Overall, our findings advance the understanding of UFM1's conjugation machinery and may serve as a basis for the development of ufmylation inhibitors.

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