7ND2 image
Deposition Date 2021-01-29
Release Date 2022-03-02
Last Version Date 2024-07-10
Entry Detail
PDB ID:
7ND2
Title:
Cryo-EM structure of the human FERRY complex
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
4.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Protein phosphatase 1 regulatory subunit 21
Gene (Uniprot):PPP1R21
Chain IDs:A, F (auth: B)
Chain Length:784
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Quinone oxidoreductase-like protein 1
Gene (Uniprot):CRYZL1
Chain IDs:B (auth: C), E (auth: D)
Chain Length:356
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Glutamine amidotransferase-like class 1 domain-containing protein 1
Gene (Uniprot):GATD1
Chain IDs:C (auth: E), D (auth: F), G (auth: H), H (auth: G)
Chain Length:227
Number of Molecules:4
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structural basis of mRNA binding by the human FERRY Rab5 effector complex.
Mol.Cell 83 1856 1871.e9 (2023)
PMID: 37267906 DOI: 10.1016/j.molcel.2023.05.009

Abstact

The pentameric FERRY Rab5 effector complex is a molecular link between mRNA and early endosomes in mRNA intracellular distribution. Here, we determine the cryo-EM structure of human FERRY. It reveals a unique clamp-like architecture that bears no resemblance to any known structure of Rab effectors. A combination of functional and mutational studies reveals that while the Fy-2 C-terminal coiled-coil acts as binding region for Fy-1/3 and Rab5, both coiled-coils and Fy-5 concur to bind mRNA. Mutations causing truncations of Fy-2 in patients with neurological disorders impair Rab5 binding or FERRY complex assembly. Thus, Fy-2 serves as a binding hub connecting all five complex subunits and mediating the binding to mRNA and early endosomes via Rab5. Our study provides mechanistic insights into long-distance mRNA transport and demonstrates that the particular architecture of FERRY is closely linked to a previously undescribed mode of RNA binding, involving coiled-coil domains.

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Primary Citation of related structures