7NBI image
Deposition Date 2021-01-26
Release Date 2021-04-28
Last Version Date 2024-11-13
Entry Detail
PDB ID:
7NBI
Keywords:
Title:
Crystal structure of a monomeric FLT3 Ligand variant
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
1.65 Å
R-Value Free:
0.20
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Fms-related tyrosine kinase 3 ligand
Gene (Uniprot):FLT3LG
Mutagens:L33D
Chain IDs:A, B
Chain Length:138
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Engineering and crystal structure of a monomeric FLT3 ligand variant.
Acta Crystallogr.,Sect.F 77 121 127 (2021)
PMID: 33830077 DOI: 10.1107/S2053230X21003289

Abstact

The overarching paradigm for the activation of class III and V receptor tyrosine kinases (RTKs) prescribes cytokine-mediated dimerization of the receptor ectodomains and homotypic receptor-receptor interactions. However, structural studies have shown that the hematopoietic receptor FLT3, a class III RTK, does not appear to engage in such receptor-receptor contacts, despite its efficient dimerization by dimeric FLT3 ligand (FL). As part of efforts to better understand the intricacies of FLT3 activation, we sought to engineer a monomeric FL. It was found that a Leu27Asp substitution at the dimer interface of the cytokine led to a stable monomeric cytokine (FLL27D) without abrogation of receptor binding. The crystal structure of FLL27D at 1.65 Å resolution revealed that the introduced point mutation led to shielding of the hydrophobic footprint of the dimerization interface in wild-type FL without affecting the conformation of the FLT3 binding site. Thus, FLL27D can serve as a monomeric FL variant to further interrogate the assembly mechanism of extracellular complexes of FLT3 in physiology and disease.

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Primary Citation of related structures
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