7N9Y image
Deposition Date 2021-06-18
Release Date 2022-03-02
Last Version Date 2025-05-28
Entry Detail
PDB ID:
7N9Y
Keywords:
SIGNALING PROTEIN/Hydrolase
Title:
Full-length TcdB and CSPG4 (401-560) complex
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Clostridioides difficile (Taxon ID: 1496)
Host Organism:
Homo sapiens
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
4.80 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
7N9Y validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Toxin B
Gene (Uniprot):tcdB
Chain IDs:B (auth: A)
Chain Length:2365
Number of Molecules:1
Biological Source:Clostridioides difficile
UniProt ID:P18177 Pfam ID:PF12918, PF12919, PF11713, PF12920, PF01473, PF19127 EC:2.4.1.B62
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Chondroitin sulfate proteoglycan 4
Gene (Uniprot):CSPG4
Chain IDs:A (auth: B)
Chain Length:140
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:Q6UVK1 Pfam ID:PF16184
Ligand Molecules
NA
Primary Citation
Structural Basis for Receptor Recognition of Clostridium difficile Toxin B and its Dissociation upon Acidification
To Be Published ? ? ? (?)
Primary Citation of related structures
7N9Y
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