7N9H image
Deposition Date 2021-06-17
Release Date 2022-06-22
Last Version Date 2024-01-10
Entry Detail
PDB ID:
7N9H
Title:
Structure of the mammalian importin a1 bound to the TDP-43 NLS
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:TAR DNA-binding protein 43
Gene (Uniprot):TARDBP
Chain IDs:B (auth: A)
Chain Length:24
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Importin subunit alpha-1
Gene (Uniprot):KPNA2
Chain IDs:A (auth: C)
Chain Length:428
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Recognition of the TDP-43 nuclear localization signal by importin alpha 1/ beta.
Cell Rep 39 111007 111007 (2022)
PMID: 35767952 DOI: 10.1016/j.celrep.2022.111007

Abstact

Cytoplasmic mislocalization of the TAR-DNA binding protein of 43 kDa (TDP-43) leads to large, insoluble aggregates that are a hallmark of amyotrophic lateral sclerosis and frontotemporal dementia. Here, we study how importin α1/β recognizes TDP-43 bipartite nuclear localization signal (NLS). We find that the NLS makes extensive contacts with importin α1, especially at the minor NLS-binding site. NLS binding results in steric clashes with the C terminus of importin α1 that disrupts the TDP-43 N-terminal domain (NTD) dimerization interface. A putative phosphorylation site in the proximity of TDP-43 R83 at the minor NLS site destabilizes binding to importins by reducing the NLS backbone dynamics. Based on these data, we explain the pathogenic role of several post-translational modifications and mutations in the proximity of TDP-43 minor NLS site that are linked to disease and shed light on the chaperone activity of importin α1/β.

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Primary Citation of related structures
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