7N8N image
Deposition Date 2021-06-15
Release Date 2021-08-04
Last Version Date 2024-06-05
Entry Detail
PDB ID:
7N8N
Title:
Melbournevirus nucleosome like particle
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.89 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Histone H4-H3 doublet
Gene (Uniprot):MEL_368
Chain IDs:A, C
Chain Length:244
Number of Molecules:2
Biological Source:Melbournevirus
Polymer Type:polypeptide(L)
Molecule:Histone H2B-H2A doublet
Gene (Uniprot):MEL_369
Chain IDs:B, D
Chain Length:297
Number of Molecules:2
Biological Source:Melbournevirus
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (147-MER)
Chain IDs:E (auth: I)
Chain Length:147
Number of Molecules:1
Biological Source:Escherichia coli
Polymer Type:polydeoxyribonucleotide
Molecule:DNA (147-MER)
Chain IDs:F (auth: J)
Chain Length:147
Number of Molecules:1
Biological Source:Escherichia coli
Ligand Molecules
Primary Citation
Virus-encoded histone doublets are essential and form nucleosome-like structures.
Cell 184 4237 4250.e19 (2021)
PMID: 34297924 DOI: 10.1016/j.cell.2021.06.032

Abstact

The organization of genomic DNA into defined nucleosomes has long been viewed as a hallmark of eukaryotes. This paradigm has been challenged by the identification of "minimalist" histones in archaea and more recently by the discovery of genes that encode fused remote homologs of the four eukaryotic histones in Marseilleviridae, a subfamily of giant viruses that infect amoebae. We demonstrate that viral doublet histones are essential for viral infectivity, localize to cytoplasmic viral factories after virus infection, and ultimately are found in the mature virions. Cryogenic electron microscopy (cryo-EM) structures of viral nucleosome-like particles show strong similarities to eukaryotic nucleosomes despite the limited sequence identify. The unique connectors that link the histone chains contribute to the observed instability of viral nucleosomes, and some histone tails assume structural roles. Our results further expand the range of "organisms" that require nucleosomes and suggest a specialized function of histones in the biology of these unusual viruses.

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Primary Citation of related structures