7N5C image
Entry Detail
PDB ID:
7N5C
Keywords:
Title:
6218 TCR in complex with H2Db PA with an engineered TCR-pMHC disulfide bond
Biological Source:
PDB Version:
Deposition Date:
2021-06-05
Release Date:
2022-07-20
Method Details:
Experimental Method:
Resolution:
1.87 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:H-2 class I histocompatibility antigen, D-B alpha chain
Chain IDs:A
Chain Length:277
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Beta-2-microglobulin
Chain IDs:B
Chain Length:100
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:peptide from Polymerase acidic protein
Mutations:E4C
Chain IDs:C
Chain Length:10
Number of Molecules:1
Biological Source:Influenza A virus
Polymer Type:polypeptide(L)
Description:Fusion protein of T cell receptor alpha variable 21-DV12 with T-cell receptor, sp3.4 alpha chain
Mutations:S110C
Chain IDs:D
Chain Length:204
Number of Molecules:1
Biological Source:Mus musculus, Homo sapiens
Polymer Type:polypeptide(L)
Description:Fusion protein of T cell receptor beta, variable 29 and Human nkt tcr beta chain
Chain IDs:E
Chain Length:240
Number of Molecules:1
Biological Source:Mus musculus, Homo sapiens
Ligand Molecules
Primary Citation
Covalent TCR-peptide-MHC interactions induce T cell activation and redirect T cell fate in the thymus.
Nat Commun 13 4951 4951 (2022)
PMID: 35999236 DOI: 10.1038/s41467-022-32692-4

Abstact

Interactions between a T cell receptor (TCR) and a peptide-major histocompatibility complex (pMHC) ligand are typically mediated by noncovalent bonds. By studying T cells expressing natural or engineered TCRs, here we describe covalent TCR-pMHC interactions that involve a cysteine-cysteine disulfide bond between the TCR and the peptide. By introducing cysteines into a known TCR-pMHC combination, we demonstrate that disulfide bond formation does not require structural rearrangement of the TCR or the peptide. We further show these disulfide bonds still form even when the initial affinity of the TCR-pMHC interaction is low. Accordingly, TCR-peptide disulfide bonds facilitate T cell activation by pMHC ligands with a wide spectrum of affinities for the TCR. Physiologically, this mechanism induces strong Zap70-dependent TCR signaling, which triggers T cell deletion or agonist selection in the thymus cortex. Covalent TCR-pMHC interactions may thus underlie a physiological T cell activation mechanism that has applications in basic immunology and potentially in immunotherapy.

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Primary Citation of related structures