7N2R image
Entry Detail
PDB ID:
7N2R
Keywords:
Title:
AS4.3-PRPF3-HLA*B27
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2021-05-29
Release Date:
2022-12-07
Method Details:
Experimental Method:
Resolution:
2.28 Å
R-Value Free:
0.28
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Human leukocyte antigen (HLA) B27
Chain IDs:C (auth: A)
Chain Length:278
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Beta-2-microglobulin
Chain IDs:D (auth: B)
Chain Length:100
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Pre-MRNA Processing Factor 3
Chain IDs:E (auth: C)
Chain Length:9
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:AS4.3 T cell receptor alpha chain
Chain IDs:A (auth: D)
Chain Length:204
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:AS4.3 T cell receptor beta chain
Chain IDs:B (auth: F)
Chain Length:242
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation

Abstact

Human leucocyte antigen B*27 (HLA-B*27) is strongly associated with inflammatory diseases of the spine and pelvis (for example, ankylosing spondylitis (AS)) and the eye (that is, acute anterior uveitis (AAU))1. How HLA-B*27 facilitates disease remains unknown, but one possible mechanism could involve presentation of pathogenic peptides to CD8+ T cells. Here we isolated orphan T cell receptors (TCRs) expressing a disease-associated public β-chain variable region-complementary-determining region 3β (BV9-CDR3β) motif2-4 from blood and synovial fluid T cells from individuals with AS and from the eye in individuals with AAU. These TCRs showed consistent α-chain variable region (AV21) chain pairing and were clonally expanded in the joint and eye. We used HLA-B*27:05 yeast display peptide libraries to identify shared self-peptides and microbial peptides that activated the AS- and AAU-derived TCRs. Structural analysis revealed that TCR cross-reactivity for peptide-MHC was rooted in a shared binding motif present in both self-antigens and microbial antigens that engages the BV9-CDR3β TCRs. These findings support the hypothesis that microbial antigens and self-antigens could play a pathogenic role in HLA-B*27-associated disease.

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Protein

Chemical

Disease

Primary Citation of related structures