7MW8 image
Deposition Date 2021-05-15
Release Date 2022-05-18
Last Version Date 2024-10-23
Entry Detail
PDB ID:
7MW8
Keywords:
Title:
Crystal Structure Analysis of Xac Nucleotide Pyrophosphatase/Phosphodiesterase
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.30
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Phosphodiesterase-nucleotide pyrophosphatase
Gene (Uniprot):GUH15_11905, XAC3562_610174
Mutations:T90A
Chain IDs:A (auth: D), B, C, D (auth: A), E, F
Chain Length:427
Number of Molecules:6
Biological Source:Xanthomonas citri
Polymer Type:polyribonucleotide
Molecule:pApG
Chain IDs:G (auth: J), H (auth: K), I (auth: L), J (auth: M), K (auth: N), L (auth: O)
Chain Length:2
Number of Molecules:6
Biological Source:synthetic construct
Ligand Molecules
Primary Citation
ENPP1's regulation of extracellular cGAMP is a ubiquitous mechanism of attenuating STING signaling.
Proc.Natl.Acad.Sci.USA 119 e2119189119 e2119189119 (2022)
PMID: 35588451 DOI: 10.1073/pnas.2119189119

Abstact

The metazoan innate immune second messenger 2′3′-cGAMP is present both inside and outside cells. However, only extracellular cGAMP can be negatively regulated by the extracellular hydrolase ENPP1. Here, we determine whether ENPP1’s regulation of extracellular cGAMP is a ubiquitous mechanism of attenuating stimulator of interferon genes (STING) signaling. We identified ENPP1H362A, a point mutation that cannot degrade the 2′-5′ linkage in cGAMP while maintaining otherwise normal function. The selectivity of this histidine is conserved down to bacterial nucleotide pyrophosphatase/phosphodiesterase (NPP), allowing structural analysis and suggesting an unexplored ancient history of 2′-5′ cyclic dinucleotides. Enpp1H362A mice demonstrated that extracellular cGAMP is not responsible for the devastating phenotype in ENPP1-null humans and mice but is responsible for antiviral immunity and systemic inflammation. Our data define extracellular cGAMP as a pivotal STING activator, identify an evolutionarily critical role for ENPP1 in regulating inflammation, and suggest a therapeutic strategy for viral and inflammatory conditions by manipulating ENPP1 activity.

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Primary Citation of related structures