7MPA image
Deposition Date 2021-05-04
Release Date 2021-06-30
Last Version Date 2024-05-15
Entry Detail
PDB ID:
7MPA
Title:
Structure and topology of DWORF in bicelles by oriented solid-state NMR
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Conformers Calculated:
5000
Conformers Submitted:
10
Selection Criteria:
structures with the lowest energy
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Sarcoplasmic/endoplasmic reticulum calcium ATPase regulator DWORF
Gene (Uniprot):STRIT1
Chain IDs:A
Chain Length:36
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
A kink in DWORF helical structure controls the activation of the sarcoplasmic reticulum Ca 2+ -ATPase.
Structure 30 360 ? (2022)
PMID: 34875216 DOI: 10.1016/j.str.2021.11.003

Abstact

SERCA is a P-type ATPase embedded in the sarcoplasmic reticulum and plays a central role in muscle relaxation. SERCA's function is regulated by single-pass membrane proteins called regulins. Unlike other regulins, dwarf open reading frame (DWORF) expressed in cardiac muscle has a unique activating effect. Here, we determine the structure and topology of DWORF in lipid bilayers using a combination of oriented sample solid-state NMR spectroscopy and replica-averaged orientationally restrained molecular dynamics. We found that DWORF's structural topology consists of a dynamic N-terminal domain, an amphipathic juxtamembrane helix that crosses the lipid groups at an angle of 64°, and a transmembrane C-terminal helix with an angle of 32°. A kink induced by Pro15, unique to DWORF, separates the two helical domains. A single Pro15Ala mutant significantly decreases the kink and eliminates DWORF's activating effect on SERCA. Overall, our findings directly link DWORF's structural topology to its activating effect on SERCA.

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Primary Citation of related structures