7MFT image
Entry Detail
PDB ID:
7MFT
EMDB ID:
Title:
Glutamate synthase, glutamate dehydrogenase counter-enzyme complex (GudB6-GltA6-GltB6)
Biological Source:
PDB Version:
Deposition Date:
2021-04-11
Release Date:
2022-01-05
Method Details:
Experimental Method:
Resolution:
3.90 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Glutamate dehydrogenase
Chain IDs:A
Chain Length:424
Number of Molecules:1
Biological Source:Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 = DSM 10
Polymer Type:polypeptide(L)
Description:Glutamate synthase (NADPH) large chain
Chain IDs:B (auth: G)
Chain Length:1520
Number of Molecules:1
Biological Source:Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 = DSM 10
Polymer Type:polypeptide(L)
Description:Glutamate synthase (NADPH) small chain
Mutations:D78G
Chain IDs:C (auth: I)
Chain Length:524
Number of Molecules:1
Biological Source:Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 = DSM 10
Primary Citation
A counter-enzyme complex regulates glutamate metabolism in Bacillus subtilis.
Nat.Chem.Biol. 18 161 170 (2022)
PMID: 34931064 DOI: 10.1038/s41589-021-00919-y

Abstact

Multi-enzyme assemblies composed of metabolic enzymes catalyzing sequential reactions are being increasingly studied. Here, we report the discovery of a 1.6 megadalton multi-enzyme complex from Bacillus subtilis composed of two enzymes catalyzing opposite ('counter-enzymes') rather than sequential reactions: glutamate synthase (GltAB) and glutamate dehydrogenase (GudB), which make and break glutamate, respectively. In vivo and in vitro studies show that the primary role of complex formation is to inhibit the activity of GudB. Using cryo-electron microscopy, we elucidated the structure of the complex and the molecular basis of inhibition of GudB by GltAB. The complex exhibits unusual oscillatory progress curves and is necessary for both planktonic growth, in glutamate-limiting conditions, and for biofilm growth, in glutamate-rich media. The regulation of a key metabolic enzyme by complexing with its counter enzyme may thus enable cell growth under fluctuating glutamate concentrations.

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