7MBR image
Entry Detail
PDB ID:
7MBR
EMDB ID:
Title:
Cryo-EM structure of zebrafish TRPM5 in the presence of 6 uM calcium (apo state)
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2021-04-01
Release Date:
2021-07-07
Method Details:
Experimental Method:
Resolution:
2.80 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Transient receptor potential melastatin 5
Chain IDs:A, B, C, D
Chain Length:1165
Number of Molecules:4
Biological Source:Danio rerio
Primary Citation
Structures of the TRPM5 channel elucidate mechanisms of activation and inhibition.
Nat.Struct.Mol.Biol. 28 604 613 (2021)
PMID: 34168372 DOI: 10.1038/s41594-021-00607-4

Abstact

The Ca2+-activated TRPM5 channel plays essential roles in taste perception and insulin secretion. However, the mechanism by which Ca2+ regulates TRPM5 activity remains elusive. We report cryo-EM structures of the zebrafish TRPM5 in an apo closed state, a Ca2+-bound open state, and an antagonist-bound inhibited state. We define two novel ligand binding sites: a Ca2+ site (CaICD) in the intracellular domain and an antagonist site in the transmembrane domain (TMD). The CaICD site is unique to TRPM5 and has two roles: modulating the voltage dependence and promoting Ca2+ binding to the CaTMD site, which is conserved throughout TRPM channels. Conformational changes initialized from both Ca2+ sites cooperatively open the ion-conducting pore. The antagonist NDNA wedges into the space between the S1-S4 domain and pore domain, stabilizing the transmembrane domain in an apo-like closed state. Our results lay the foundation for understanding the voltage-dependent TRPM channels and developing new therapeutic agents.

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