ISDA

Deposition Date 2021-03-28

Release Date 2021-08-25

Last Version Date 2023-10-18

Entry Detail

PDB ID:

7M7K

Keywords:

TRANSFERASE

Title:

Crystal structure of uridine bound to Geobacillus thermoglucosidasius pyrimidine nucleoside phosphorylase PyNP

Biological Source:

Source Organism:

Parageobacillus thermoglucosidasius (Taxon ID: 1426)

Host Organism:

Escherichia coli BL21(DE3)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.89 Å

R-Value Free:

0.20

R-Value Work:

0.17

R-Value Observed:

0.17

Space Group:

P 41 21 2

Download Validation Report

Macromolecular Entities

Polymer Type:polypeptide(L)
Molecule:Pyrimidine-nucleoside phosphorylase
Chain IDs:A (auth: B)
Chain Length:438
Number of Molecules:1
Biological Source:Parageobacillus thermoglucosidasius

Ligand Molecules

SO4

URI

Primary Citation

Diversification of 4'-Methylated Nucleosides by Nucleoside Phosphorylases

Kaspar, F, Seeger, M, Westarp, S, Kollmann, C, Lehmann, A.P, Pausch, P, Kemper, S, Neubauer, P, Bange, G, Schallmey, A, Werz, D.B, Kurreck, A.Show

Acs Catalysis ? 10830 10835 (2021)

DOI: 10.1021/acscatal.1c02589

Primary Citation of related structures