ISDA

Deposition Date 2021-03-10

Release Date 2022-03-16

Last Version Date 2023-10-18

Entry Detail

PDB ID:

7M08

Keywords:

TRANSFERASE

Title:

Post-catalytic nicked complex of DNA Polymerase Lambda with bound 1-nt gapped SSB substrate and incoming dUMPNPP

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)
synthetic construct (Taxon ID: 32630)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.70 Å

R-Value Free:

0.20

R-Value Work:

0.18

R-Value Observed:

0.18

Space Group:

P 21 21 21

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:DNA polymerase lambda
Gene (Uniprot):POLL
Chain IDs:A
Chain Length:346
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q9UGP5 Pfam ID:PF14716, PF10391, PF14792, PF14791 EC:4.2.99.B1

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(P*GP*CP*CP*G)-3')
Chain IDs:D
Chain Length:4
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*CP*AP*GP*TP*AP*CP*T)-3')
Chain IDs:C (auth: P)
Chain Length:7
Number of Molecules:1
Biological Source:synthetic construct

Polymer Type:polydeoxyribonucleotide
Molecule:DNA (5'-D(*CP*GP*GP*CP*AP*GP*TP*AP*CP*TP*G)-3')
Chain IDs:B (auth: T)
Chain Length:11
Number of Molecules:1
Biological Source:synthetic construct

Ligand Molecules