7LVW image
Deposition Date 2021-02-26
Release Date 2021-03-24
Last Version Date 2024-10-30
Entry Detail
PDB ID:
7LVW
Title:
Structure of RSV F in Complex with VHH Cl184
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.10 Å
R-Value Free:
0.23
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Fusion glycoprotein F0
Chain IDs:A, C (auth: B), D (auth: C), E (auth: D), F (auth: E), G (auth: F)
Chain Length:500
Number of Molecules:6
Biological Source:Respiratory syncytial virus
Polymer Type:polypeptide(L)
Molecule:F-VHH-Cl184
Chain IDs:B (auth: G), H (auth: I), I (auth: K), J (auth: L), K (auth: J), L (auth: H)
Chain Length:152
Number of Molecules:6
Biological Source:Lama glama
Primary Citation
A vulnerable, membrane-proximal site in human respiratory syncytial virus F revealed by a prefusion-specific single-domain antibody.
J.Virol. 95 ? ? (2021)
PMID: 33692208 DOI: 10.1128/JVI.02279-20

Abstact

Human respiratory syncytial virus (RSV) is a major cause of lower respiratory tract disease, especially in young children and the elderly. The fusion protein (F) exists in a pre- and postfusion conformation and is the main target of RSV-neutralizing antibodies. Highly potent RSV-neutralizing antibodies typically bind sites that are unique to the prefusion conformation of F. In this study we screened a single-domain antibody (VHH) library derived from a llama immunized with prefusion-stabilized F and identified a prefusion F-specific VHH that can neutralize RSV A at subnanomolar concentrations. Structural analysis revealed that this VHH primarily binds to antigenic site I while also making contacts with residues in antigenic site III and IV. This new VHH reveals a previously underappreciated membrane-proximal region sensitive for neutralization.ImportanceRSV is an important respiratory pathogen. This study describes a prefusion F-specific VHH that primarily binds to antigenic site I of RSV F. This is the first time that a prefusion F-specific antibody that binds this site is reported. In general, antibodies that bind to site I are poorly neutralizing, whereas the VHH described here neutralizes RSV A at subnanomolar concentrations. Our findings contribute to insights into the RSV F antigenic map.

Legend

Protein

Chemical

Disease

Primary Citation of related structures