7LVN image
Deposition Date 2021-02-26
Release Date 2022-03-02
Last Version Date 2024-11-20
Entry Detail
PDB ID:
7LVN
Keywords:
Title:
Solution structure of tarantula toxin omega-Avsp1a
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Conformers Calculated:
30
Conformers Submitted:
20
Selection Criteria:
structures with the lowest energy and best stereochemical properties as accord to MolProbity
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Omega-Avsp1a
Chain IDs:A
Chain Length:37
Number of Molecules:1
Biological Source:Avicularia sp. AVIC29FPM
Ligand Molecules
Primary Citation
The Tarantula Toxin omega-Avsp1a Specifically Inhibits Human Ca V 3.1 and Ca V 3.3 via the Extracellular S3-S4 Loop of the Domain 1 Voltage-Sensor.
Biomedicines 10 ? ? (2022)
PMID: 35625803 DOI: 10.3390/biomedicines10051066

Abstact

Inhibition of T-type calcium channels (CaV3) prevents development of diseases related to cardiovascular and nerve systems. Further, knockout animal studies have revealed that some diseases are mediated by specific subtypes of CaV3. However, subtype-specific CaV3 inhibitors for therapeutic purposes or for studying the physiological roles of CaV3 subtypes are missing. To bridge this gap, we employed our spider venom library and uncovered that Avicularia spec. ("Amazonas Purple", Peru) tarantula venom inhibited specific T-type CaV channel subtypes. By using chromatographic and mass-spectrometric techniques, we isolated and sequenced the active toxin ω-Avsp1a, a C-terminally amidated 36 residue peptide with a molecular weight of 4224.91 Da, which comprised the major peak in the venom. Both native (4.1 μM) and synthetic ω-Avsp1a (10 μM) inhibited 90% of CaV3.1 and CaV3.3, but only 25% of CaV3.2 currents. In order to investigate the toxin binding site, we generated a range of chimeric channels from the less sensitive CaV3.2 and more sensitive CaV3.3. Our results suggest that domain-1 of CaV3.3 is important for the inhibitory effect of ω-Avsp1a on T-type calcium channels. Further studies revealed that a leucine of T-type calcium channels is crucial for the inhibitory effect of ω-Avsp1a.

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Primary Citation of related structures