7LPS image
Deposition Date 2021-02-12
Release Date 2021-06-02
Last Version Date 2023-10-18
Entry Detail
PDB ID:
7LPS
Keywords:
Title:
Crystal structure of DDB1-CRBN-ALV1 complex bound to Helios (IKZF2 ZF2)
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.78 Å
R-Value Free:
0.30
R-Value Work:
0.28
R-Value Observed:
0.28
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:DNA damage-binding protein 1
Gene (Uniprot):DDB1
Chain IDs:A, D, G, J
Chain Length:1140
Number of Molecules:4
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Protein cereblon
Gene (Uniprot):CRBN
Chain IDs:B, E, H, K
Chain Length:390
Number of Molecules:4
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Zinc finger protein Helios
Gene (Uniprot):IKZF2
Chain IDs:C, F, I, L
Chain Length:29
Number of Molecules:4
Biological Source:Homo sapiens
Primary Citation
Acute pharmacological degradation of Helios destabilizes regulatory T cells.
Nat.Chem.Biol. 17 711 717 (2021)
PMID: 34035522 DOI: 10.1038/s41589-021-00802-w

Abstact

The zinc-finger transcription factor Helios is critical for maintaining the identity, anergic phenotype and suppressive activity of regulatory T (Treg) cells. While it is an attractive target to enhance the efficacy of currently approved immunotherapies, no existing approaches can directly modulate Helios activity or abundance. Here, we report the structure-guided development of small molecules that recruit the E3 ubiquitin ligase substrate receptor cereblon to Helios, thereby promoting its degradation. Pharmacological Helios degradation destabilized the anergic phenotype and reduced the suppressive activity of Treg cells, establishing a route towards Helios-targeting therapeutics. More generally, this study provides a framework for the development of small-molecule degraders for previously unligandable targets by reprogramming E3 ligase substrate specificity.

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