7LKB image
Deposition Date 2021-02-02
Release Date 2021-12-15
Last Version Date 2024-11-20
Entry Detail
PDB ID:
7LKB
Title:
Crystal structure of PfCSP peptide 21 with vaccine-elicited human anti-malaria antibody m42.127
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.80 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Circumsporozoite protein
Chain IDs:C (auth: A), F (auth: D)
Chain Length:15
Number of Molecules:2
Biological Source:Plasmodium falciparum 3D7
Polymer Type:polypeptide(L)
Molecule:m42.127 Fab heavy Chain
Chain IDs:A (auth: H), D (auth: B)
Chain Length:233
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:m42.127 Fab light chain
Chain IDs:B (auth: L), E (auth: C)
Chain Length:223
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation

Abstact

Repeat antigens, such as the Plasmodium falciparum circumsporozoite protein (PfCSP), use both sequence degeneracy and structural diversity to evade the immune response. A few PfCSP-directed antibodies have been identified that are effective at preventing malaria infection, including CIS43, but how these repeat-targeting antibodies might be improved has been unclear. Here, we engineered a humanized mouse model in which B cells expressed inferred human germline CIS43 (iGL-CIS43) B cell receptors and used both vaccination and bioinformatic analysis to obtain variant CIS43 antibodies with improved protective capacity. One such antibody, iGL-CIS43.D3, was significantly more potent than the current best-in-class PfCSP-directed antibody. We found that vaccination with a junctional epitope peptide was more effective than full-length PfCSP at recruiting iGL-CIS43 B cells to germinal centers. Structure-function analysis revealed multiple somatic hypermutations that combinatorically improved protection. This mouse model can thus be used to understand vaccine immunogens and to develop highly potent anti-malarial antibodies.

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Primary Citation of related structures