ISDA

Deposition Date 2021-01-13

Release Date 2021-05-05

Last Version Date 2024-11-13

Entry Detail

PDB ID:

7LDJ

Keywords:

VIRAL PROTEIN/IMMUNE SYSTEM

Title:

SARS-CoV-2 receptor binding domain in complex with WNb-2

Biological Source:

Source Organism:

Severe acute respiratory syndrome coronavirus 2 (Taxon ID: 2697049)
Vicugna pacos (Taxon ID: 30538)

Host Organism:

Homo sapiens

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.36 Å

R-Value Free:

0.26

R-Value Work:

0.21

R-Value Observed:

0.21

Space Group:

P 1 21 1

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Spike glycoprotein
Gene (Uniprot):S
Chain IDs:A (auth: B), B (auth: A), C, D
Chain Length:199
Number of Molecules:4
Biological Source:Severe acute respiratory syndrome coronavirus 2

UniProt ID:P0DTC2 Pfam ID:PF09408

Polymer Type:polypeptide(L)
Molecule:Nanobody 2
Chain IDs:E, F, G, H
Chain Length:131
Number of Molecules:4
Biological Source:Vicugna pacos

Ligand Molecules