7L7G image
Deposition Date 2020-12-28
Release Date 2021-03-24
Last Version Date 2024-03-06
Entry Detail
PDB ID:
7L7G
Keywords:
Title:
Electron cryo-microscopy of the eukaryotic translation initiation factor 2B from Homo sapiens (updated model of PDB ID: 6CAJ)
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Translation initiation factor eIF-2B subunit epsilon
Gene (Uniprot):EIF2B5
Mutations:I587V
Chain IDs:A (auth: B), E (auth: A)
Chain Length:721
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Translation initiation factor eIF-2B subunit beta
Gene (Uniprot):EIF2B2
Chain IDs:C, G (auth: D)
Chain Length:368
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Translation initiation factor eIF-2B subunit delta
Gene (Uniprot):EIF2B4
Chain IDs:D (auth: F), H (auth: E)
Chain Length:523
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Translation initiation factor eIF-2B subunit alpha
Gene (Uniprot):EIF2B1
Chain IDs:I (auth: H), J (auth: G)
Chain Length:305
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Translation initiation factor eIF-2B subunit gamma
Gene (Uniprot):EIF2B3
Chain IDs:B (auth: J), F (auth: I)
Chain Length:452
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
eIF2B conformation and assembly state regulates the integrated stress response.
Elife 10 ? ? (2021)
PMID: 33688831 DOI: 10.7554/eLife.65703

Abstact

The integrated stress response (ISR) is activated by phosphorylation of the translation initiation factor eIF2 in response to various stress conditions. Phosphorylated eIF2 (eIF2-P) inhibits eIF2's nucleotide exchange factor eIF2B, a twofold symmetric heterodecamer assembled from subcomplexes. Here, we monitor and manipulate eIF2B assembly in vitro and in vivo. In the absence of eIF2B's α-subunit, the ISR is induced because unassembled eIF2B tetramer subcomplexes accumulate in cells. Upon addition of the small-molecule ISR inhibitor ISRIB, eIF2B tetramers assemble into active octamers. Surprisingly, ISRIB inhibits the ISR even in the context of fully assembled eIF2B decamers, revealing allosteric communication between the physically distant eIF2, eIF2-P, and ISRIB binding sites. Cryo-electron microscopy structures suggest a rocking motion in eIF2B that couples these binding sites. eIF2-P binding converts eIF2B decamers into 'conjoined tetramers' with diminished substrate binding and enzymatic activity. Canonical eIF2-P-driven ISR activation thus arises due to this change in eIF2B's conformational state.

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Primary Citation of related structures