7KYS image
Deposition Date 2020-12-08
Release Date 2021-06-09
Last Version Date 2023-10-18
Entry Detail
PDB ID:
7KYS
Keywords:
Title:
Crystal structure of human BCCIP beta (Native2)
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.22
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:BRCA2 and CDKN1A-interacting protein
Gene (Uniprot):BCCIP
Chain IDs:A, B, C
Chain Length:256
Number of Molecules:3
Biological Source:Homo sapiens
Primary Citation
Structure of human BCCIP and implications for binding and modification of partner proteins.
Protein Sci. 30 693 699 (2021)
PMID: 33452718 DOI: 10.1002/pro.4026

Abstact

BCCIP was isolated based on its interactions with tumor suppressors BRCA2 and p21. Knockdown or knockout of BCCIP causes embryonic lethality in mice. BCCIP deficient cells exhibit impaired cell proliferation and chromosome instability. BCCIP also plays a key role in biogenesis of ribosome 60S subunits. BCCIP is conserved from yeast to humans, but it has no discernible sequence similarity to proteins of known structures. Here we report two crystal structures of an N-terminal truncated human BCCIPβ, consisting of residues 61-314. Structurally BCCIP is similar to GCN5-related acetyltransferases (GNATs) but contains different sequence motifs. Moreover, both acetyl-CoA and substrate-binding grooves are altered in BCCIP. A large 19-residue flap over the putative CoA binding site adopts either an open or closed conformation in BCCIP. The substrate binding groove is significantly reduced in size and is positively charged despite the acidic isoelectric point of BCCIP. BCCIP has potential binding sites for partner proteins and may have enzymatic activity.

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Primary Citation of related structures
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