7KYO image
Entry Detail
PDB ID:
7KYO
Title:
PsaBC from Streptococcus pneumoniae in complex with Fab
Biological Source:
PDB Version:
Deposition Date:
2020-12-08
Release Date:
2021-08-25
Method Details:
Experimental Method:
Resolution:
2.85 Å
R-Value Free:
0.27
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Manganese ABC transporter, ATP-binding protein
Chain IDs:A (auth: B)
Chain Length:240
Number of Molecules:1
Biological Source:Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466)
Polymer Type:polypeptide(L)
Description:Manganese ABC transporter, permease protein
Chain IDs:D (auth: C)
Chain Length:282
Number of Molecules:1
Biological Source:Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466)
Polymer Type:polypeptide(L)
Description:Fab heavy chain
Chain IDs:B (auth: H)
Chain Length:234
Number of Molecules:1
Biological Source:Mus musculus
Polymer Type:polypeptide(L)
Description:Fab light chain
Chain IDs:C (auth: L)
Chain Length:218
Number of Molecules:1
Biological Source:Mus musculus
Primary Citation

Abstact

Metal ions are essential for all forms of life. In prokaryotes, ATP-binding cassette (ABC) permeases serve as the primary import pathway for many micronutrients including the first-row transition metal manganese. However, the structural features of ionic metal transporting ABC permeases have remained undefined. Here, we present the crystal structure of the manganese transporter PsaBC from Streptococcus pneumoniae in an open-inward conformation. The type II transporter has a tightly closed transmembrane channel due to "extracellular gating" residues that prevent water permeation or ion reflux. Below these residues, the channel contains a hitherto unreported metal coordination site, which is essential for manganese translocation. Mutagenesis of the extracellular gate perturbs manganese uptake, while coordination site mutagenesis abolishes import. These structural features are highly conserved in metal-specific ABC transporters and are represented throughout the kingdoms of life. Collectively, our results define the structure of PsaBC and reveal the features required for divalent cation transport.

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Primary Citation of related structures