7KXR image
Deposition Date 2020-12-04
Release Date 2021-07-14
Last Version Date 2024-03-06
Entry Detail
PDB ID:
7KXR
Keywords:
Title:
Protective antigen pore translocating lethal factor N-terminal domain
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.30 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Protective antigen
Gene (Uniprot):pagA
Chain IDs:B (auth: A), C (auth: B), D (auth: C), E (auth: D), F (auth: E), G (auth: F), H (auth: G)
Chain Length:562
Number of Molecules:7
Biological Source:Bacillus anthracis
Polymer Type:polypeptide(L)
Molecule:Lethal factor
Gene (Uniprot):lef
Mutations:E126C
Chain IDs:A (auth: L)
Chain Length:263
Number of Molecules:1
Biological Source:Bacillus anthracis
Ligand Molecules
Primary Citation
Anthrax toxin translocation complex reveals insight into the lethal factor unfolding and refolding mechanism.
Sci Rep 11 13038 13038 (2021)
PMID: 34158520 DOI: 10.1038/s41598-021-91596-3

Abstact

Translocation is essential to the anthrax toxin mechanism. Protective antigen (PA), the binding component of this AB toxin, forms an oligomeric pore that translocates lethal factor (LF) or edema factor, the active components of the toxin, into the cell. Structural details of the translocation process have remained elusive despite their biological importance. To overcome the technical challenges of studying translocation intermediates, we developed a method to immobilize, transition, and stabilize anthrax toxin to mimic important physiological steps in the intoxication process. Here, we report a cryoEM snapshot of PApore translocating the N-terminal domain of LF (LFN). The resulting 3.3 Å structure of the complex shows density of partially unfolded LFN near the canonical PApore binding site. Interestingly, we also observe density consistent with an α helix emerging from the 100 Å β barrel channel suggesting LF secondary structural elements begin to refold in the pore channel. We conclude the anthrax toxin β barrel aids in efficient folding of its enzymatic payload prior to channel exit. Our hypothesized refolding mechanism has broader implications for pore length of other protein translocating toxins.

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Primary Citation of related structures