7KSQ image
Deposition Date 2020-11-23
Release Date 2022-03-30
Last Version Date 2024-11-20
Entry Detail
PDB ID:
7KSQ
Keywords:
Title:
The Structure of the moss PSI-LHCI reveals the evolution of the LHCI antenna
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.80 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Chlorophyll a-b binding protein, chloroplastic
Chain IDs:C (auth: 1)
Chain Length:192
Number of Molecules:1
Biological Source:Physcomitrium patens
Polymer Type:polypeptide(L)
Molecule:Chlorophyll a-b binding protein, chloroplastic
Gene (Uniprot):PHYPA_025495
Chain IDs:D (auth: 2)
Chain Length:203
Number of Molecules:1
Biological Source:Physcomitrium patens
Polymer Type:polypeptide(L)
Molecule:Chlorophyll a-b binding protein, chloroplastic
Chain IDs:E (auth: 3)
Chain Length:218
Number of Molecules:1
Biological Source:Physcomitrium patens
Polymer Type:polypeptide(L)
Molecule:Chlorophyll a-b binding protein, chloroplastic
Chain IDs:F (auth: 4)
Chain Length:203
Number of Molecules:1
Biological Source:Physcomitrium patens
Polymer Type:polypeptide(L)
Molecule:Photosystem I P700 chlorophyll a apoprotein A1
Gene (Uniprot):psaA
Chain IDs:A
Chain Length:742
Number of Molecules:1
Biological Source:Physcomitrium patens
Polymer Type:polypeptide(L)
Molecule:Photosystem I P700 chlorophyll a apoprotein A2
Gene (Uniprot):psaB
Chain IDs:B
Chain Length:732
Number of Molecules:1
Biological Source:Physcomitrium patens
Polymer Type:polypeptide(L)
Molecule:Photosystem I iron-sulfur center
Gene (Uniprot):psaC
Chain IDs:G (auth: C)
Chain Length:80
Number of Molecules:1
Biological Source:Physcomitrium patens
Polymer Type:polypeptide(L)
Molecule:PsaD
Gene (Uniprot):PHYPA_021401
Chain IDs:H (auth: D)
Chain Length:142
Number of Molecules:1
Biological Source:Physcomitrium patens
Polymer Type:polypeptide(L)
Molecule:PsaE
Chain IDs:I (auth: E)
Chain Length:63
Number of Molecules:1
Biological Source:Physcomitrium patens
Polymer Type:polypeptide(L)
Molecule:PSI-F
Gene (Uniprot):PHYPA_026994
Chain IDs:J (auth: F)
Chain Length:160
Number of Molecules:1
Biological Source:Physcomitrium patens
Polymer Type:polypeptide(L)
Molecule:PSI-G
Chain IDs:K (auth: G)
Chain Length:91
Number of Molecules:1
Biological Source:Physcomitrium patens
Polymer Type:polypeptide(L)
Molecule:PsaH
Chain IDs:L (auth: H)
Chain Length:87
Number of Molecules:1
Biological Source:Physcomitrium patens
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center subunit VIII
Gene (Uniprot):psaI
Chain IDs:M (auth: I)
Chain Length:34
Number of Molecules:1
Biological Source:Physcomitrium patens
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center subunit IX
Gene (Uniprot):psaJ
Chain IDs:N (auth: J)
Chain Length:41
Number of Molecules:1
Biological Source:Physcomitrium patens
Polymer Type:polypeptide(L)
Molecule:PsaK
Gene (Uniprot):PHYPA_017195
Chain IDs:O (auth: K)
Chain Length:81
Number of Molecules:1
Biological Source:Physcomitrium patens
Polymer Type:polypeptide(L)
Molecule:PSI subunit V
Chain IDs:P (auth: L)
Chain Length:160
Number of Molecules:1
Biological Source:Physcomitrium patens
Polymer Type:polypeptide(L)
Molecule:Photosystem I reaction center subunit XII
Gene (Uniprot):psaM
Chain IDs:Q (auth: M)
Chain Length:30
Number of Molecules:1
Biological Source:Physcomitrium patens
Polymer Type:polypeptide(L)
Molecule:PsaO
Gene (Uniprot):PHYPA_019829
Chain IDs:R (auth: O)
Chain Length:88
Number of Molecules:1
Biological Source:Physcomitrium patens
Primary Citation
The structure of the Physcomitrium patens photosystem I reveals a unique Lhca2 paralogue replacing Lhca4.
Nat.Plants 8 307 316 (2022)
PMID: 35190662 DOI: 10.1038/s41477-022-01099-w

Abstact

The moss Physcomitrium patens diverged from green algae shortly after the colonization of land by ancient plants. This colonization posed new environmental challenges, which drove evolutionary processes. The photosynthetic machinery of modern flowering plants is adapted to the high light conditions on land. Red-shifted Lhca4 antennae are present in the photosystem I light-harvesting complex of many green-lineage plants but absent in P. patens. The cryo-EM structure of the P. patens photosystem I light-harvesting complex I supercomplex (PSI-LHCI) at 2.8 Å reveals that Lhca4 is replaced by a unique Lhca2 paralogue in moss. This PSI-LHCI supercomplex also retains the PsaM subunit, present in Cyanobacteria and several algal species but lost in vascular plants, and the PsaO subunit responsible for binding light-harvesting complex II. The blue-shifted Lhca2 paralogue and chlorophyll b enrichment relative to flowering plants make the P. patens PSI-LHCI spectroscopically unique among other green-lineage supercomplexes. Overall, the structure represents an evolutionary intermediate PSI with the crescent-shaped LHCI common in vascular plants, and contains a unique Lhca2 paralogue that facilitates the moss's adaptation to low-light niches.

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Primary Citation of related structures