7KL1 image
Deposition Date 2020-10-28
Release Date 2020-12-23
Last Version Date 2024-12-25
Entry Detail
PDB ID:
7KL1
Keywords:
Title:
Cocrystal structure of human CaMKII-alpha (CAMK2A)kinase domain and GluN2B(S1303D)
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.25
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Calcium/calmodulin-dependent protein kinase type II subunit alpha
Gene (Uniprot):CAMK2A
Mutagens:D135N, Q223K
Chain IDs:A, B
Chain Length:268
Number of Molecules:2
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Glutamate receptor ionotropic, NMDA 2B
Gene (Uniprot):GRIN2B
Mutagens:S1303D
Chain IDs:C, D
Chain Length:22
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
CaMKII binds both substrates and activators at the active site.
Cell Rep 40 111064 111064 (2022)
PMID: 35830796 DOI: 10.1016/j.celrep.2022.111064

Abstact

Ca2+/calmodulin-dependent protein kinase II (CaMKII) is a signaling protein required for long-term memory. When activated by Ca2+/CaM, it sustains activity even after the Ca2+ dissipates. In addition to the well-known autophosphorylation-mediated mechanism, interaction with specific binding partners also persistently activates CaMKII. A long-standing model invokes two distinct S and T sites. If an interactor binds at the T-site, then it will preclude autoinhibition and allow substrates to be phosphorylated at the S site. Here, we specifically test this model with X-ray crystallography, molecular dynamics simulations, and biochemistry. Our data are inconsistent with this model. Co-crystal structures of four different activators or substrates show that they all bind to a single continuous site across the kinase domain. We propose a mechanistic model where persistent CaMKII activity is facilitated by high-affinity binding partners that kinetically compete with autoinhibition by the regulatory segment to allow substrate phosphorylation.

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