7KJK image
Deposition Date 2020-10-26
Release Date 2021-11-03
Last Version Date 2024-05-29
Entry Detail
PDB ID:
7KJK
Keywords:
VIRAL PROTEIN
Title:
The Neck region of Phage XM1 (6-fold symmetry)
Biological Source:
Source Organism:
Vibrio phage XM1 (Taxon ID: 2748688)
Method Details:
Experimental Method:
ELECTRON MICROSCOPY
Resolution:
3.60 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
7KJK validation report
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Collar spike protein
Chain IDs:G (auth: A3), H (auth: B3), I (auth: C3), J (auth: D3), K (auth: E3), L (auth: F3), M (auth: G3), N (auth: H3), O (auth: I3), P (auth: J3), Q (auth: K3), R (auth: L3), S (auth: M3), T (auth: N3), U (auth: O3), V (auth: P3), W (auth: Q3), X (auth: R3)
Chain Length:839
Number of Molecules:18
Biological Source:Vibrio phage XM1
Polymer Type:polypeptide(L)
Molecule:Head completion protein
Chain IDs:Y (auth: A4), Z (auth: B4), AA (auth: C4), BA (auth: D4), CA (auth: E4), DA (auth: F4)
Chain Length:114
Number of Molecules:6
Biological Source:Vibrio phage XM1
Polymer Type:polypeptide(L)
Molecule:Tail terminator protein
Chain IDs:A (auth: A5), B (auth: B5), C (auth: C5), D (auth: D5), E (auth: E5), F (auth: F5)
Chain Length:161
Number of Molecules:6
Biological Source:Vibrio phage XM1
Polymer Type:polypeptide(L)
Molecule:Tail sheath protein
Chain IDs:KA (auth: A6), LA (auth: B6), MA (auth: C6), NA (auth: D6), OA (auth: E6), PA (auth: F6)
Chain Length:497
Number of Molecules:6
Biological Source:Vibrio phage XM1
Polymer Type:polypeptide(L)
Molecule:Tail tube protein
Chain IDs:EA (auth: A7), FA (auth: B7), GA (auth: C7), HA (auth: D7), IA (auth: E7), JA (auth: F7)
Chain Length:143
Number of Molecules:6
Biological Source:Vibrio phage XM1
Ligand Molecules
NA
Primary Citation
Structure of Vibrio phage XM1, a simple contractile DNA injection machine
Biorxiv ? ? ? (2021)
DOI: 10.1101/2021.12.18.469577
Primary Citation of related structures
7KJK