7KHS image
Deposition Date 2020-10-21
Release Date 2020-12-02
Last Version Date 2024-04-03
Entry Detail
PDB ID:
7KHS
Title:
OgOGA IN COMPLEX WITH LIGAND 55
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.78 Å
R-Value Free:
0.29
R-Value Work:
0.27
R-Value Observed:
0.27
Space Group:
P 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Protein O-GlcNAcase
Gene (Uniprot):OG2516_04129
Chain IDs:A, B, C, D
Chain Length:449
Number of Molecules:4
Biological Source:Oceanicola granulosus
Primary Citation
Diazaspirononane Nonsaccharide Inhibitors of O-GlcNAcase (OGA) for the Treatment of Neurodegenerative Disorders.
J.Med.Chem. 63 14017 14044 (2020)
PMID: 33197187 DOI: 10.1021/acs.jmedchem.0c01479

Abstact

O-GlcNAcylation is a post-translational modification of tau understood to lower the speed and yield of its aggregation, a pathological hallmark of Alzheimer's disease (AD). O-GlcNAcase (OGA) is the only enzyme that removes O-linked N-acetyl-d-glucosamine (O-GlcNAc) from target proteins. Therefore, inhibition of OGA represents a potential approach for the treatment of AD by preserving the O-GlcNAcylated tau protein. Herein, we report the multifactorial optimization of high-throughput screening hit 8 to a potent, metabolically stable, and orally bioavailable diazaspirononane OGA inhibitor (+)-56. The human OGA X-ray crystal structure has been recently solved, but bacterial hydrolases are still widely used as structural homologues. For the first time, we reveal how a nonsaccharide series of inhibitors binds bacterial OGA and discuss the suitability of two different bacterial orthologues as surrogates for human OGA. These breakthroughs enabled structure-activity relationships to be understood and provided context and boundaries for the optimization of druglike properties.

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